Ab initio studies on the structure of and atomic interactions in cellulose IIII crystals

作者:Ishikawa Tetsuya; Hayakawa Daichi; Miyamoto Hitomi; Ozawa Motoyasu; Ozawa Tomonaga; Ueda Kazuyoshi*
来源:Carbohydrate Research, 2015, 417: 72-77.
DOI:10.1016/j.carres.2015.09.006

摘要

The crystal structure of cellulose IIII was analyzed using first-principles density functional theory (DFT). The geometry was optimized using variable-cell relaxation, as implemented in Quantum ESPRESSO. The Perdew-Burke-Ernzerhof (PBE) functional with a correction term for long-range van der Waals interactions (PBE-D) reproduced the experimental structure well. By using the optimized crystal structure, the interactions existed among the cellulose chains in the crystal were precisely investigated using the NBO analysis. The results showed that the weak bonding nature of CH/O and the hydrogen bonding occur among glucose molecules in the optimized crystal structure. To investigate the strength of interaction, dimeric and trimeric glucose units were extracted from the crystal, and analyzed using MP2 ab initio counterpoise methods with BSSE correction. The results estimated the strength of the interactions. That is, the packed chains along with a-axis interacts with weak bonding nature of CH/O and dispersion interactions by -7.50 kcal/mol, and two hydrogen bonds of O2-HO2 center dot center dot center dot O6 and O6-HO6 center dot center dot center dot O2 connect the neighboring packed chains with -11.9 kcal/mol. Moreover, FMO4 calculation was also applied to the optimized crystal structure to estimate the strength of the interactions. These methods can well estimate the interactions existed in the crystal structure of cellulose IIII.

  • 出版日期2015-11-19

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