Dynamic Compression of Single Nanochannel Confined DNA via a Nanodozer Assay

作者:Khorshid Ahmed; Zimny Philip; Tetreault La Roche David; Massarelli Geremia; Sakaue Takahiro*; Reisner Walter
来源:Physical Review Letters, 2014, 113(26): 268104.
DOI:10.1103/PhysRevLett.113.268104

摘要

We show that a single DNA molecule confined and extended in a nanochannel can be dynamically compressed by sliding a permeable gasket at a fixed velocity relative to the stationary polymer. The gasket is realized experimentally by optically trapping a nanosphere inside a nanochannel. The trapped bead acts like a %26quot;nanodozer,%26quot; directly applying compressive forces to the molecule without requirement of chemical attachment. Remarkably, these strongly nonequilibrium measurements can be quantified via a simple nonlinear convective-diffusion formalism and yield insights into the local blob statistics, allowing us to conclude that the compressed nanochannel-confined chain exhibits mean-field behavior.

  • 出版日期2014-12-30
  • 单位McGill