A statistical model of intra-chromosome contact maps

作者:Nazarov Leonid I; Tamm Mikhail V; Avetisov Vladik A; Nechaev Sergei K*
来源:Soft Matter, 2015, 11(5): 1019-1025.
DOI:10.1039/c4sm02519a

摘要

A statistical model describing a fine structure of the intra-chromosome maps obtained by a genome-wide chromosome conformation capture method (Hi-C) is proposed. The model combines hierarchical chain folding with a quenched heteropolymer structure of primary chromatin sequences. It is conjectured that the observed Hi-C maps are statistical averages over many different ways of hierarchical genome folding. It is shown that the existence of a quenched primary structure coupled with hierarchical folding induces a full range of features observed in experimental Hi-C maps: hierarchical elements, chess-board intermittency and large-scale compartmentalization.

  • 出版日期2015