Novel isolates double the number of chemotrophic species and allow the first description of higher taxa in Acidobacteria subdivision 4

作者：Pascual Javier; Wuest Pia K; Geppert Alicia; Foesel Baerbel U; Huber Katharina J; Overmann Joerg^*

来源：Systematic and Applied Microbiology, 2015, 38(8): 534-544.

DOI：10.1016/j.syapm.2015.08.001

• Acidobacteria
• Blastocatellaceae
• Blastocatellales
• Blastocatellia
• Oligotrophic
• Subdivision 4

Despite their high phylogenetic diversity and abundance in soils worldwide, Acidobacteria represent an enigmatic bacterial phylum. Four novel Acidobacteria strains were isolated from Namibian semiarid savannah soils using low-nutrient cultivation media and extended incubation periods. 16S rRNA gene sequence analyses placed the isolates within Acidobacteria subdivision 4. Sequence identities with their closest relatives Aridibacter famidurans and Blastocatella fastidiosa were <= 94.9%. The Gram-negative, non-motile, rod-shaped, aerobic, and chemoorganotrophic bacteria grew at minimum doubling times of 5-14h and formed tiny white to pinkish colonies. Major polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, and phosphatidylglycerol. The major isoprenoid quinone was MK-8. The major fatty acid methyl esters comprised iso-C-15:0, iso-C-15:1 H/C-13:0 3-OH, and C-16:1 omega 7c/C-16:1 omega 6c. Based on a polyphasic taxonomic characterization, strain Ac_18_E7(T) (=DSM 26557(T) = LMG 28656(T)) represented a novel species and genus, Tellurimicrobium multivorans gen. nov., sp. nov. The other strains constituted three independent species of the novel genus Stenotrophobacter gen. nov., Stenotrophobacter terrae sp. nov. (Ac_28_D10(T) = DSM 26560(T) = LMG 28657(T)), S. roseus sp. nov. (Ac_15_C4(T) = DSM 29891(T) = LMG 28889(T)), and S. namibiensis sp. nov. (Ac_17_F2(T) = DSM 29893(T) = LMG 28890(T)). These isolates doubled the number of established species and permitted the description of higher taxa of Acidobacteria subdivision 4. The family Blastocatellaceae fam. nov. is proposed in order to summarize the currently known oligotrophic, slightly acidophilic to neutrophilic mesophiles from arid soils. The superordinated order Blastocatellales ord. nov. and Blastocatellia classis nov. also include the terrestrial species Pyrinomonas methylaliphatogenes and the anoxygenic photoheterotrophic species Chloracidobacterium thermophilum from microbial mats.

• 出版日期2015-12