A Polymorphic Microsatellite Repeat within the ECE-1c Promoter Is Involved in Transcriptional Start Site Determination, Human Evolution, and Alzheimer%26apos;s Disease

作者:Li Yaosi; Seidel Kerstin; Marschall Peter; Klein Michael; Hope Antonia; Schacherl Jens; Schmitz Jennifer; Menk Mario; Schefe Jan H; Reinemund Jana; Hugel Rebecca; Walden Peter; Schlosser Andreas; Volkmer Rudolf; Schimkus Julia; Koelsch Heike; Maier Wolfgang; Kornhuber Johannes; Froelich Lutz; Klare Sabrina; Kirsch Sebastian; Schmerbach Kristin; Scheele Sylvia; Grittner Ulrike; Zollmann Frank; Goldin Lang Petra; Peters Oliver; Kintscher Ulrich; Unger Thomas
来源:Journal of Neuroscience, 2012, 32(47): 16807-16820.
DOI:10.1523/JNEUROSCI.2636-12.2012

摘要

Genetic factors strongly contribute to the pathogenesis of sporadic Alzheimer%26apos;s disease (AD). Nevertheless, genome-wide association studies only yielded single nucleotide polymorphism loci of moderate importance. In contrast, microsatellite repeats are functionally less characterized structures within our genomes. Previous work has shown that endothelin-converting enzyme-1 (ECE-1) is able to reduce amyloid beta content. Here we demonstrate that a CpG-CA repeat within the human ECE-1c promoter is highly polymorphic, harbors transcriptional start sites, is able to recruit the transcription factors poly(ADP-ribose) polymerase-1 and splicing factor proline and glutamine-rich, and is functional regarding haplotype-specific promoter activity. Furthermore, genotyping of 403 AD patients and 444 controls for CpG-CA repeat length indicated shifted allelic frequency distributions. Sequencing of 245 haplotype clones demonstrated that the overall CpG-CA repeat composition of AD patients and controls is distinct. Finally, we show that human and chimpanzee [CpG](m)-[CA](n) ECE-1c promoter repeats are genetically and functionally distinct. Our data indicate that a short genomic repeat structure constitutes a novel core promoter element, coincides with human evolution, and contributes to the pathogenesis of AD.