XiP: a computational environment to create, extend and share workflows

作者：Nagasaki Masao^*; Fujita Andre; Sekiya Yayoi; Saito Ayumu; Ikeda Emi; Li Chen; Miyano Satoru

来源：Bioinformatics, 2013, 29(1): 137-139.

DOI：10.1093/bioinformatics/bts630

XiP (eXtensible integrative Pipeline) is a flexible, editable and modular environment with a user-friendly interface that does not require previous advanced programming skills to run, construct and edit workflows. XiP allows the construction of workflows by linking components written in both R and Java, the analysis of high-throughput data in grid engine systems and also the development of customized pipelines that can be encapsulated in a package and distributed. XiP already comes with several ready-to-use pipeline flows for the most common genomic and transcriptomic analysis and similar to 300 computational components.

• 出版日期2013-1
• 单位河北医科大学