A Threonine Stabilizes the NiC and NiR Catalytic Intermediates of [NiFe]-hydrogenase

作者:Abou Hamdan Abbas; Ceccaldi Pierre; Lebrette Hugo; Gutierrez Sanz Oscar; Richaud Pierre; Cournac Laurent; Guigliarelli Bruno; De lacey Antonio L; Leger Christophe; Volbeda Anne; Burlat Benedicte; Dementin Sebastien*
来源:JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290(13): 8550-8558.
DOI:10.1074/jbc.M114.630491

摘要

The heterodimeric [NiFe] hydrogenase from Desulfovibrio fructosovorans catalyzes the reversible oxidation of H-2 into protons and electrons. The catalytic intermediates have been attributed to forms of the active site (NiSI, NiR, and NiC) detected using spectroscopic methods under potentiometric but noncatalytic conditions. Here, we produced variants by replacing the conserved Thr-18 residue in the small subunit with Ser, Val, Gln, Gly, or Asp, and we analyzed the effects of these mutations on the kinetic (H-2 oxidation, H-2 production, and H/D exchange), spectroscopic (IR, EPR), and structural properties of the enzyme. The mutations disrupt the H-bond network in the crystals and have a strong effect on H-2 oxidation and H-2 production turnover rates. However, the absence of correlation between activity and rate of H/D exchange in the series of variants suggests that the alcoholic group of Thr-18 is not necessarily a proton relay. Instead, the correlation between H-2 oxidation and production activity and the detection of the NiC species in reduced samples confirms that NiC is a catalytic intermediate and suggests that Thr-18 is important to stabilize the local protein structure of the active site ensuring fast NiSI-NiC-NiR interconversions during H-2 oxidation/production.

  • 出版日期2015-3-27