Discovery of Novel Alphacoronaviruses in European Rodents and Shrews

作者:Tsoleridis Theocharis; Onianwa Okechukwu; Horncastle Emma; Dayman Emma; Zhu Miaoran; Danjittrong Taechasit; Wachtl Marta; Behnke Jerzy M; Chapman Sarah; Strong Victoria; Dobbs Phillipa; Ball Jonathan K; Tarlinton Rachael E; McClure C Patrick
来源:Viruses-Basel, 2016, 8(3): 84.
DOI:10.3390/v8030084

摘要

Eight hundred and thirteen European rodents and shrews encompassing seven different species were screened for alphacoronaviruses using PCR detection. Novel alphacoronaviruses were detected in the species Rattus norvegicus, Microtus agrestis, Sorex araneus and Myodes glareolus. These, together with the recently described Lucheng virus found in China, form a distinct rodent/shrew-specific clade within the coronavirus phylogeny. Across a highly conserved region of the viral polymerase gene, the new members of this clade were up to 22% dissimilar at the nucleotide level to the previously described Lucheng virus. As such they might represent distinct species of alphacoronaviruses. These data greatly extend our knowledge of wildlife reservoirs of alphacoronaviruses.

  • 出版日期2016-3

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