Complete genome of a metabolically-diverse marine bacterium Shewanella japonica KCTC 22435(T)

作者：Kim Kyung Mo^*; Choe Hanna; Kim Byung Kwon; Nasir Arshan

来源：Marine Genomics, 2017, 35: 39-42.

DOI：10.1016/j.margen.2017.05.004

• Shewanella japonica
• Microbial fuel cell
• Cytochrome c
• Complete genome

Shewanella japonica KCTC 22435(T) is a facultatively anaerobic, Gram-negative, mesophilic, rod-shaped bacterium isolated from sea water at the Pacific Institute of Bio-organic Chemistry of the Marine Experimental Station, Troitza Bay, Gulf of Peter the Great, Russia. Here, we report the complete genome of S. japonica ICCTC 22435(T), which consists of 4,975,677 bp (G + C content of 40.80%) with a single chromosome, 4036 protein-coding genes, 97 tRNAs and 8 rRNA operons. Genes detected in the genome reveal that the strain possesses a type II secretion system, cytochrome c family proteins with various numbers of heme-binding motifs, and metabolic path-ways for utilizing diverse carbon sources, supporting the potential of KCTC 22435(T) to generate electricity in salinity culture conditions.

• 出版日期2017-10
• 单位中国极地研究中心