Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood

作者：Lee Hae Won; Kim Dae Won; Lee Mi Hwa; Kim Byung Yong; Cho Yong Joon; Yim Kyung June; Song Hye Seon; Rhee Jin Kyu; Seo Myung Ji; Choi Hak Jong; Choi Jong Soon; Lee Dong Gi; Yoon Changmann; Nam Young Do^*; Roh Seong Woon

来源：Standards in Genomic Sciences, 2015, 10(1): 53.

DOI：10.1186/s40793-015-0051-8

• Extremely halophilic archaea
• Haladaptatus cibarius
• Genome sequence
• Salt-fermented seafood
• Glycine betaine
• Trehalose

An extremely halophilic archaeon, Haladaptatus cibarius D43(T), was isolated from traditional Korean salt-rich fermented seafood. Strain D43(T) shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28(T), is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43(T). The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G + C content of 57.76 %.

• 出版日期2015-8-13