Assessing the genetic differentiation of Holstein cattle herds in the Leningrad region using F-st statistics

作者：Smaragdov Michael G^*; Kudinov Andrei A; Uimari Pekka

来源：Agricultural and Food Science, 2018, 27(2): 96-101.

DOI：10.23986/afsci.69777

• Wright's F-st
• dairy cattle
• herds
• genetic diversity

Holstein bulls and semen have been imported to Russia from Western countries since the 1970s. The objective of our study was to examine the effect of this introgression on genetic diversity between various commercial Holstein herds in the Leningrad region. A total of 803 Holstein cows from 13 herds were genotyped using the Illumina BovineSNP50 v.2 array. The pairwise Hudson's estimator of F-st values between 13 herds varied from 0.002 to 0.015, which is less than values usually obtained between dairy cattle breeds (> 0.1). The mean of these pairwise F-st values revealed differences between herds depending, mainly, on the proportion of common sires shared between the herds. In addition, we investigated the cause of negative F-st values. Based on our results, these negative values could be interpreted as an excess of within-herd genetic diversity over the between-herds genetic diversity. Our results show that introgressions of Holstein genes into Russian Black and White cattle of the Leningrad region have created genetic separation between herds similar with those for Jersey cows in USA, Australia and New Zealand.

• 出版日期2018