Novel Micro-Nanofluidic Chip and Device for Fast Identifying Pathogenic Bacteria

作者:Huang, Qin; Han, Shanqiao; Zhang, Yan; Qu, Xiuhua; Fu, Jianpeng; Zhang, Ze; Ding, Lifeng; Qian, Yangming; Zhao, Xiaohang*; Huang, Guoliang
来源:Journal of Computational and Theoretical Nanoscience, 2015, 12(5): 756-761.
DOI:10.1166/jctn.2015.3798

摘要

Molecular biological methods such as PCR and LAMP, which are based on nucleic acid amplification, is becoming more and more popular because of their shorter reaction time and real-time detection ability. This study aimed to develop a micro-nanofluidic bio-reaction detecting system for isothermal DNA amplification and sensitive real-time detection of the amplification for sequence-special molecular identification. The identification system contains a plastic micro-nanofluidic chip and a real-time confocal detector. The DNA amplification method is based on loop-mediated isothermal amplification (LAMP). The primary chip was designed with the SolidWorks (TM) and fabricated from the optical disk production line with multiple parallel bioreactors in micro-nano liter in volume. Listeria moncytogenes, a bacterial species that causes diarrhea was chosen as the biological test object. The response time of the micro-nanofluidic system with a volume of 1.45 mu L was reduced to 45 minutes. The detection limit was as low as 1 DNA copy. The detector provided highly sensitive multi-target parallel detection in real time and low background noise. Chip's inert surface, UNG and dUTP in the reaction system were able to improve amplification stability in micro-nanoliter reaction assays. Our system can be developed to a novel high throughput lab-on-a-chip device and is promising to be used for single-molecule droplet amplification. It also has the potential for applications such as nanomedicine, clinical molecular diagnostics, and nanobiotechnology.