A Model for Direction Sensing in Dictyostelium discoideum: Ras Activity and Symmetry Breaking Driven by a G(beta gamma)-Mediated, G(alpha 2)-Ric8-Dependent Signal Transduction Network

作者：Cheng Yougan; Othmer Hans^*

来源：PLoS Computational Biology, 2016, 12(5): e1004900.

DOI：10.1371/journal.pcbi.1004900

Chemotaxis is a dynamic cellular process, comprised of direction sensing, polarization and locomotion, that leads to the directed movement of eukaryotic cells along extracellular gradients. As a primary step in the response of an individual cell to a spatial stimulus, direction sensing has attracted numerous theoretical treatments aimed at explaining experimental observations in a variety of cell types. Here we propose a new model of direction sensing based on experiments using Dictyostelium discoideum (Dicty). The model is built around a reaction-diffusion-translocation system that involves three main component processes: a signal detection step based on G-protein-coupled receptors (GPCR) for cyclic AMP (cAMP), a transduction step based on a heterotrimetic G protein G(alpha 2 beta gamma), and an activation step of a monomeric G-protein Ras. The model can predict the experimentally-observed response of cells treated with latrunculin A, which removes feedback from downstream processes, under a variety of stimulus protocols. We show that G(alpha 2 beta gamma) cycling modulated by Ric8, a nonreceptor guanine exchange factor for G(alpha 2) in Dicty, drives multiple phases of Ras activation and leads to direction sensing and signal amplification in cAMP gradients. The model predicts that both G(alpha 2) and G(beta gamma) are essential for direction sensing, in that membrane-localized G(alpha 2)*, the activated GTP-bearing form of G(alpha 2), leads to asymmetrical recruitment of RasGEF and Ric8, while globally-diffusing G(beta gamma) mediates their activation. We show that the predicted response at the level of Ras activation encodes sufficient 'memory' to eliminate the 'back-of-the wave' problem, and the effects of diffusion and cell shape on direction sensing are also investigated. In contrast with existing LEGI models of chemotaxis, the results do not require a disparity between the diffusion coefficients of the Ras activator GEF and the Ras inhibitor GAP. Since the signal pathways we study are highly conserved between Dicty and mammalian leukocytes, the model can serve as a generic one for direction sensing.

• 出版日期2016-5