emPAI Calc-for the estimation of protein abundance from large-scale identification data by liquid chromatography-tandem mass spectrometry

作者：Shinoda Kosaku; Tomita Masaru; Ishihama Yasushi^*

来源：Bioinformatics, 2010, 26(4): 576-577.

DOI：10.1093/bioinformatics/btp700

AemPAI Calc is an open-source web application for the estimation of protein abundance. It uses the correlation between the number of identified peptides and protein abundance in mass spectrometry-based proteomic experiments. The program is the first implementation of our previously reported emPAI algorithm; it calculates the emPAI from the protein identification results obtained by database search engines such as Mascot.(TM)

• 出版日期2010-2-15