High-quality draft genome sequence of Gracilimonas tropica CL-CB462(T) (DSM 19535(T)), isolated from a Synechococcus culture

作者：Choi Dong Han; Ahn Chisang; Jang Gwang Il; Lapidus Alla; Han James; Reddy T B K; Huntemann Marcel; Pati Amrita; Ivanova Natalia; Markowitz Victor; Rohde Manfred; Tindall Brian; Goeker Markus; Woyke Tanja; Klenk Hans Peter; Kyrpides Nikos C; Cho Byung Cheol^*

来源：Standards in Genomic Sciences, 2015, 10(1): 98.

DOI：10.1186/s40793-015-0088-8

• Genome
• Gracilimonas tropica
• Marine
• Sphingobacteriia
• GEBA

Gracilimonas tropica Choi et al. 2009 is a member of order Sphingobacteriales, class Sphingobacteriia. Three species of the genus Gracilimonas have been isolated from marine seawater or a salt mine and showed extremely halotolerant and mesophilic features, although close relatives are extremely halophilic or thermophilic. The type strain of the type species of Gracilimonas, G. tropica DSM19535(T), was isolated from a Synechococcus culture which was established from the tropical sea-surface water of the Pacific Ocean. The genome of the strain DSM19535T was sequenced through the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes project. Here, we describe the genomic features of the strain. The 3,831,242 bp long draft genome consists of 48 contigs with 3373 protein-coding and 53 RNA genes. The strain seems to adapt to phosphate limitation and requires amino acids from external environment. In addition, genomic analyses and pasteurization experiment suggested that G. tropica DSM19535(T) did not form spore.

• 出版日期2015-11-11