Dynamic Flexibility of Hydrogenase Active Site Models Studied with 2D-IR Spectroscopy

作者:Eckert Peter A; Kubarych Kevin J
来源:Journal of Physical Chemistry A, 2017, 121(3): 608-615.
DOI:10.1021/acs.jpca.6b11962

摘要

Hydrogenase enzymes enable organisms to use H-2 as an energy source, having evolved extremely efficient biological catalysts for the reversible oxidation of molecular hydrogen. Small-molecule mimics of these enzymes provide both simplified models of the catalysis reactions and potential artificial catalysts that might be used to facilitate a hydrogen economy. We have studied two diiron hydrogenase mimics, mu-pdt-[Fe(CO)(3)](2) and mu-edt-[Fe(CO)(3)](2) (pdt = propanedithiolate, edt = ethanedithiolate), in a series of alkane solvents and have observed significant ultrafast spectral dynamics using two-dimensional infrared (2D-IR) spectroscopy. Since solvent fluctuations in nonpolar alkanes do not lead to substantial electrostatic modulations in a solutes vibrational mode frequencies, we attribute the spectral diffusion dynamics to intramolecular flexibility. The intramolecular origin is supported by the absence of any measurable solvent viscosity dependence, indicating that the frequency fluctuations are not coupled to the solvent motional dynamics. Quantum chemical calculations reveal a pronounced coupling between the low-frequency torsional rotation of the carbonyl ligands and the terminal CO stretching vibrations. The flexibility of the CO ligands has been proposed to play a central role in the catalytic reaction mechanism, and our results highlight that the CO ligands are highly flexible on a picosecond time scale.

  • 出版日期2017-1-26