Model-based evolutionary analysis: the natural history of phage-shock stress response

作者:Huvet Maxime*; Toni Tina; Tan Hui; Jovanovic Goran; Engl Christoph; Buck Martin; Stumpf Michael P H
来源:Biochemical Society Transactions, 2009, 37(4): 762-767.
DOI:10.1042/BST0370762

摘要

The evolution of proteins is inseparably linked to their function. Because most biological processes involve a number of different proteins, it may become impossible to study the evolutionary properties of proteins in isolation. In the present article, we show how simple mechanistic models of biological processes can complement conventional comparative analyses of biological traits. We use the specific example of the phage-shock stress response, which has been well characterized in Escherichia coli, to elucidate patterns of gene sharing and sequence conservation across bacterial species.

  • 出版日期2009-8
  • 单位上海生物信息技术研究中心