A Genome-Wide Association Analysis Identified a Novel Susceptible Locus for Pathological Myopia at 11q24.1

作者：Nakanishi Hideo^*; Yamada Ryo; Gotoh Norimoto; Hayashi Hisako; Yamashiro Kenji; Shimada Noriaki; Ohno Matsui Kyoko; Mochizuki Manabu; Saito Masaaki; Iida Tomohiro; Matsuo Keitaro; Tajima Kazuo; Yoshimura Nagahisa; Matsuda Fumihiko

来源：PLoS Genetics, 2009, 5(9): e1000660.

DOI：10.1371/journal.pgen.1000660

Myopia is one of the most common ocular disorders worldwide. Pathological myopia, also called high myopia, comprises 1% to 5% of the general population and is one of the leading causes of legal blindness in developed countries. To identify genetic determinants associated with pathological myopia in Japanese, we conducted a genome-wide association study, analyzing 411,777 SNPs with 830 cases and 1,911 general population controls in a two-stage design (297 cases and 934 controls in the first stage and 533 cases and 977 controls in the second stage). We selected 22 SNPs that showed P-values smaller than 10(-4) in the first stage and tested them for association in the second stage. The meta-analysis combining the first and second stages identified an SNP, rs577948, at chromosome 11q24.1, which was associated with the disease (P = 2.22x10(-7) and OR of 1.37 with 95% confidence interval: 1.21-1.54). Two genes, BLID and LOC399959, were identified within a 200-kb DNA encompassing rs577948. RT-PCR analysis demonstrated that both genes were expressed in human retinal tissue. Our results strongly suggest that the region at 11q24.1 is a novel susceptibility locus for pathological myopia in Japanese.

• 出版日期2009-9
• 单位中国地震局; 河北医科大学