Distinct microbial communities associated with buried soils in the Siberian tundra

作者:Gittel Antje*; Barta Jiri; Kohoutova Iva; Mikutta Robert; Owens Sarah; Gilbert Jack; Schnecker Joerg; Wild Birgit; Hannisdal Bjarte; Maerz Joeran; Lashchinskiy Nikolay; Capek Petr; Santruckova Hana; Gentsch Norman; Shibistova Olga; Guggenberger Georg; Richter Andreas; Torsvik Vigdis L; Schleper Christa; Urich Tim
来源:The ISME Journal, 2014, 8(4): 841-853.
DOI:10.1038/ismej.2013.219

摘要

Cryoturbation, the burial of topsoil material into deeper soil horizons by repeated freeze-thaw events, is an important storage mechanism for soil organic matter (SOM) in permafrost-affected soils. Besides abiotic conditions, microbial community structure and the accessibility of SOM to the decomposer community are hypothesized to control SOM decomposition and thus have a crucial role in SOM accumulation in buried soils. We surveyed the microbial community structure in cryoturbated soils from nine soil profiles in the northeastern Siberian tundra using high-throughput sequencing and quantification of bacterial, archaeal and fungal marker genes. We found that bacterial abundances in buried topsoils were as high as in unburied topsoils. In contrast, fungal abundances decreased with depth and were significantly lower in buried than in unburied topsoils resulting in remarkably low fungal to bacterial ratios in buried topsoils. Fungal community profiling revealed an associated decrease in presumably ectomycorrhizal (ECM) fungi. The abiotic conditions (low to subzero temperatures, anoxia) and the reduced abundance of fungi likely provide a niche for bacterial, facultative anaerobic decomposers of SOM such as members of the Actinobacteria, which were found in significantly higher relative abundances in buried than in unburied topsoils. Our study expands the knowledge on the microbial community structure in soils of Northern latitude permafrost regions, and attributes the delayed decomposition of SOM in buried soils to specific microbial taxa, and particularly to a decrease in abundance and activity of ECM fungi, and to the extent to which bacterial decomposers are able to act as their functional substitutes.

  • 出版日期2014-4
  • 单位中国极地研究中心