A novel chromatographic method allows on-line reanalysis of the proteome

作者:Waanders Leonie F; Almeida Reinaldo; Prosser Simon; Cox Juergen; Eikel Daniel; Allen Mark H; Schultz Gary A*; Mann Matthias
来源:Molecular & Cellular Proteomics, 2008, 7(8): 1452-1459.
DOI:10.1074/mcp.M800141-MCP200

摘要

Liquid chromatography combined with electrospray ionization is widely used for direct analysis of polar and labile molecules by LCMS. The on-line coupling in LCMS is a major strength but also causes a principal limitation that each eluting analyte has to be analyzed immediately and is not available for detailed interrogation after the LCMS run. Here we developed a new chromatographic strategy, which removes this limitation. After column separation the flow is split, one portion is analyzed directly, and the other is diverted to a capture capillary. After the direct LCMS run, the flow is switched, and the portion stored in the capillary is analyzed ("replay run"). We describe a setup consisting of an analytical column, a splitting valve, and a focusing column, which performs at full sensitivity and undiminished chromatographic resolution. We demonstrate three principal advantages of this system: nearly continuous MS utilization, duplicate analysis without requirement for additional sample, and targeting of important but undersampled features in the replay run.

  • 出版日期2008-8