The Rational Design of Specific Peptide Inhibitor against p38 alpha MAPK at Allosteric-Site: A Therapeutic Modality for HNSCC

作者:Gill Kamaldeep; Nigam Lokesh; Singh Ratnakar; Kumar Suresh; Subbarao Naidu; Chauhan Shyam Singh; Dey Sharmistha*
来源:PLos One, 2014, 9(7): e101525.
DOI:10.1371/journal.pone.0101525

摘要

p38 alpha is a significant target for drug designing against cancer. The overproduction of p38 alpha MAPK promotes tumorigenesis in head and neck squamous cell carcinoma (HNSCC). The ATP binding and an allosteric site referred as DFG are the key sites of the p38 alpha mitogen activated protein kinase (MAPK) exploited for the design of inhibitors. This study demonstrated design of peptide inhibitor on the basis of allosteric site using Glide molecular docking software and the biochemical analysis of the best modeled peptide. The best fitted tetrapeptide (FWCS) in the allosteric site inhibited the pure recombinant and serum p38 alpha of HNSCC patients by 74 and 72%, respectively. The potency of the peptide was demonstrated by its IC50 (4.6 nM) and K-D (3.41x10(-10) M) values, determined by ELISA and by surface plasmon resonance (SPR) technology, respectively. The cell viability of oral cancer i.e. KB cell line was reduced in dose dependent manner by 60 and 97% by the treatment of peptide and the IC50 was 600 and 210 mu M after 24 and 72 h incubation, respectively. Our result provides an insight for the development of a proficient small peptide as a promising anticancer agent targeting DFG site of p38 alpha kinase.