Application of time series discretization using evolutionary programming for classification of precancerous cervical lesions

作者：Acosta Mesa Hector Gabriel^*; Rechy Ramirez Fernando; Mezura Montes Efren; Cruz Ramirez Nicandro; Hernandez Jimenez Rodolfo

来源：Journal of Biomedical Informatics, 2014, 49: 73-83.

DOI：10.1016/j.jbi.2014.03.004

• Times series discretization
• Evolutionary algorithms
• Classification
• Cervical cancer detection

In this work, we present a novel application of time series discretization using evolutionary programming for the classification of precancerous cervical lesions. The approach optimizes the number of intervals in which the length and amplitude of the time series should be compressed, preserving the important information for classification purposes. Using evolutionary programming, the search for a good discretization scheme is guided by a cost function which considers three criteria: the entropy regarding the classification, the complexity measured as the number of different strings needed to represent the complete data set, and the compression rate assessed as the length of the discrete representation. This discretization approach is evaluated using a time series data based on temporal patterns observed during a classical test used in cervical cancer detection; the classification accuracy reached by our method is compared with the well-known times series discretization algorithm SAX and the dimensionality reduction method PCA. Statistical analysis of the classification accuracy shows that the discrete representation is as efficient as the complete raw representation for the present application, reducing the dimensionality of the time series length by 97%. This representation is also very competitive in terms of classification accuracy when compared with similar approaches.

• 出版日期2014-6