Derxia lacustris sp nov., a nitrogen-fixing bacterium isolated from a freshwater lake

作者：Chen Wen Ming; Huang Wei Cheng; Sheu Shih Yi^*

来源：International Journal of Systematic and Evolutionary Microbiology, 2013, 63(Pt_3): 965-970.

DOI：10.1099/ijs.0.041186-0

A novel nitrogen-fixing strain, designated HL-12(T), was isolated from a freshwater lake in Taiwan. Cells of strain HL-12(T) were aerobic, Gram-negative, motile rods that were surrounded by a thick capsule, contained poly-beta-hydroxybutyrate granules, and formed light-yellow to brownish-red colonies. Growth occurred at 15-40 degrees C (optimum 25-35 degrees C), at pH 6.0-7.0 (optimum pH 6.0) and with 0-4% NaCl (optimum 0-1%). Phylogenetic analysis based on 16S rRNA gene sequences showed that strain HL-12(T) belonged to the genus Derxia and exhibited 99.1 and 98.8 % 16S rRNA gene sequence similarity, respectively, with Derxia gummosa IAM 14990 and D. gummosa IAM 13946(T). The major fatty acids (>10 %) of strain HL-12(T) were summed feature 3 (comprising C-16:1 omega 7C and/or C-16:1 omega 6C), C-16:0 and C-18:1 omega 7c. The cellular hydroxy fatty acids were C-12:0 3-OH, C-14:0 2-OH and C-14:0 3-OH. The isoprenoid quinone was Q-8 and the DNA G+C content was 72.0 molok. The polar lipid profile contained phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and several unknown aminophospholipids and phospholipids. DNA DNA relatedness between strain HL-12(T) and LMG 3975 and LMG 3977(T) was <700%. On the basis of the genotypic and phenotypic data, strain HL-12(T) represents a novel species in the genus Derxia, for which the name Derxia lacustris sp. nov. is proposed. The type strain is HL-12(T) (=BCRC 80208(T) =KCTC 23311(T)).