Complete chloroplast genome of green tide algae Ulva flexuosa (Ulvophyceae, Chlorophyta) with comparative analysis

作者：Cai, Chuner; Wang, Lingke; Zhou, Lingjie; He, Peimin^*; Jiao, Binghua^*

来源：PLos One, 2017, 12(9): e0184196.

DOI：10.1371/journal.pone.0184196

• SUBSP PILIFERA CHLOROPHYTA
• SEQUENCE
• PHYLOGENIES
• EVOLUTION
• PROGRAM
• BLOCKS
• GENES
• TOOL
• SEA

Ulva flexuosa, one kind of green tide algae, has outbroken in the Yellow Sea of China during the past ten years. In the present study, we sequenced the chloroplast genome of U. flexuosa followed by annotation and comparative analysis. It indicated that the chloroplast genomes had high conservation among Ulva spp., and high rearrangement outside them. Though U. flexuosa was closer to U. linza than U. fasciata in phylogenetic tree, the average Ka/Ks between U. flexuosa and U. linza assessed by 67 protein-coding genes was higher than those between U. flexuosa and other species in Ulva spp., due to the variation of psbZ, psbM and ycf20. Our results laid the foundation for the future studies on the evolution of chloroplast genomes of Ulva, as well as the molecular identification of U. flexuosa varieties.

• 出版日期2017-9-1
• 单位中国人民解放军第二军医大学; 上海海洋大学