Complete Genome Sequence of a Novel Newcastle Disease Virus Strain Isolated from a Chicken in West Africa

作者:Kim Shin Hee; Nayak Subhashree; Paldurai Anandan; Nayak Baibaswata; Samuel Arthur; Aplogan Gilbert L; Awoume Kodzo A; Webby Richard J; Ducatez Mariette F; Collins Peter L; Samal Siba K*
来源:Journal of Virology, 2012, 86(20): 11394-11395.
DOI:10.1128/JVI.01922-12

摘要

The complete genome sequence of an African Newcastle disease virus (NDV) strain isolated from a chicken in Togo in 2009 was determined. The genome is 15,198 nucleotides (nt) in length and is classified in genotype VII in the class II cluster. Compared to common vaccine strains, the African strain contains a previously described 6-nt insert in the downstream untranslated region of the N gene and a novel 6-nt insert in the HN-L intergenic region. Genome length differences are a marker of the natural history of NDV. This is the first description of a class II NDV strain with a genome of 15,198 nt and a 6-nt insert in the HN-L intergenic region. Sequence divergence relative to vaccine strains was substantial, likely contributes to outbreaks, and illustrates the continued evolution of new NDV strains in West Africa.

  • 出版日期2012-10