Analysis of Genetic Inheritance in a Family Quartet by Whole-Genome Sequencing

作者:Roach Jared C; Glusman Gustavo; Smit Arian F A; Huff Chad D; Hubley Robert; Shannon Paul T; Rowen Lee; Pant Krishna P; Goodman Nathan; Bamshad Michael; Shendure Jay; Drmanac Radoje; Jorde Lynn B; Hood Leroy*; Galas David J
来源:Science, 2010, 328(5978): 636-639.
DOI:10.1126/science.1186802

摘要

We analyzed the whole-genome sequences of a family of four, consisting of two siblings and their parents. Family-based sequencing allowed us to delineate recombination sites precisely, identify 70% of the sequencing errors (resulting in > 99.999% accuracy), and identify very rare single-nucleotide polymorphisms. We also directly estimated a human intergeneration mutation rate of similar to 1.1 x 10(-8) per position per haploid genome. Both offspring in this family have two recessive disorders: Miller syndrome, for which the gene was concurrently identified, and primary ciliary dyskinesia, for which causative genes have been previously identified. Family-based genome analysis enabled us to narrow the candidate genes for both of these Mendelian disorders to only four. Our results demonstrate the value of complete genome sequencing in families.

  • 出版日期2010-4-30