A genome-wide association study platform built on iPlant cyber-infrastructure

作者:Wang Liya; Ware Doreen; Lushbough Carol; Merchant Nirav; Stein Lincoln
来源:Concurrency and Computation: Practice and Experience (CCPE) , 2015, 27(2): 420-432.
DOI:10.1002/cpe.3236

摘要

We demonstrate a flexible genome-wide association study platform built upon the iPlant Collaborative Cyber-infrastructure. The platform supports big data management, sharing, and large-scale study of both genotype and phenotype data on clusters. End users can add their own analysis tools and create customized analysis workflows through the graphical user interfaces in both iPlant Discovery Environment and BioExtract server.

  • 出版日期2015-2