Design of Bcl-2 and Bcl-xL Inhibitors with Subnanomolar Binding Affinities Based upon a New Scaffold

作者：Zhou Haibin; Chen Jianfang; Meagher Jennifer L; Yang Chao Yie; Aguilar Angelo; Liu Liu; Bai Longchuan; Gong Xin; Cai Qian; Fang Xueliang; Stuckey Jeanne A; Wang Shaomeng^*

来源：Journal of Medicinal Chemistry, 2012, 55(10): 4664-4682.

DOI：10.1021/jm300178u

Employing a structure-based strategy, we have designed a new class of potent small-molecule inhibitors of the anti-apoptotic proteins Bcl-2 and Bcl-xL. An initial lead compound with a new scaffold was designed based upon the crystal structure of Bcl-xL and U.S. Food and Drug Administration (FDA) approved drugs and was found to have an affinity of 100 mu M for both Bcl-2 and Bcl-xL. Linking this weak lead to another weak-affinity fragment derived from Abbott's ABT-737 led to an improvement of the binding affinity by a factor of >10 000. Further optimization ultimately yielded compounds with subnanomolar binding affinities for both Bcl-2 and Bcl-xL and potent cellular activity. The best compound (21) binds to Bcl-xL and Bcl-2 with K-i < 1 nM, inhibits cell growth in the H146 and H1417 small-cell lung cancer cell lines with IC50 values of 60-90 nM, and induces robust cell death in the H146 cancer cell line at 30-100 nM.

• 出版日期2012-5-24